The detailed information of tRNA gene sequence


Sequence ID>SRA1015703
Genome IDSRR023846.164979
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 72
End posion on genome 146
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaccacgca
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGCGGCCCTTTCACGGCTGAAGCACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
tcgttggttt
Secondary structure (Cloverleaf model)
>SRA1015703	Glu	TTC
                   a      ACCA tcgttggttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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