The detailed information of tRNA gene sequence


Sequence ID>SRA1015708
Genome IDSRR023846.166290
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 201
End posion on genome 276
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acagccacac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
ttacggtaaa
Secondary structure (Cloverleaf model)
>SRA1015708	Ala	TGC
                   c      ACCA ttacggtaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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