The detailed information of tRNA gene sequence


Sequence ID>SRA1015739
Genome IDSRR023846.175924
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 68
End posion on genome 144
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccacacaga
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
aacatcaaga
Secondary structure (Cloverleaf model)
>SRA1015739	Met	CAT
                   a      ACCA aacatcaaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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