The detailed information of tRNA gene sequence


Sequence ID>SRA1015744
Genome IDSRR023846.178803
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 127
End posion on genome 52
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
gtccgcctgc
tRNA gene sequence
GCCGCTTTAGCTCAGTTGGTAGAGCATCGCATTCGTAATGCGGGGGTCACAGGTTCGAGT
CCTGTAAGCGGCACCA
Downstream region at tRNA end position
tatcccttaa
Secondary structure (Cloverleaf model)
>SRA1015744	Thr	CGT
                   c      ACCA tatcccttaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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