The detailed information of tRNA gene sequence


Sequence ID>SRA1015749
Genome IDSRR023846.180476
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 189
End posion on genome 265
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cggcgcgtcc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGCGGTTCGAGC
CCGTCACCCGCCCACC
Downstream region at tRNA end position 
Atatgttaca
Secondary structure (Cloverleaf model)
>SRA1015749	Val	TAC
                   c      CACC Atatgttaca
                     G - C
                     G - C
                     G   G
                     C   C
                     G - C
                     G - C
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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