The detailed information of tRNA gene sequence


Sequence ID>SRA1015754
Genome IDSRR023846.182106
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 249
End posion on genome 173
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgccactt
tRNA gene sequence 
GGCTACATAGCTCAGTTGGTTAGAGCATAGCATTCATAATGCTGGGGTCCGGGGTTCAAG
TCCCTGTGTAGCCACCA
Downstream region at tRNA end position 
agtacctgtt
Secondary structure (Cloverleaf model)
>SRA1015754	Met	CAT
                   t      ACCA agtacctgtt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     A - T          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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