The detailed information of tRNA gene sequence


Sequence ID>SRA1015764
Genome IDSRR023846.187494
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 154
End posion on genome 78
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cagcgggtgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCTAGGCCCACCA
Downstream region at tRNA end position 
cacacaagtg
Secondary structure (Cloverleaf model)
>SRA1015764	Ile	GAT
                   t      ACCA cacacaagtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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