The detailed information of tRNA gene sequence


Sequence ID>SRA1015808
Genome IDSRR023846.208070
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 208
End posion on genome 132
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agcgaggcgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
ctttcgcgct
Secondary structure (Cloverleaf model)
>SRA1015808	Ile	GAT
                   c      ACCA ctttcgcgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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