The detailed information of tRNA gene sequence


Sequence ID>SRA1015819
Genome IDSRR023846.211557
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 182
End posion on genome 106
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcggcgttc
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGTAAGTTCAAC
TCTTACTCGGCCCACCA
Downstream region at tRNA end position 
acgcatttgg
Secondary structure (Cloverleaf model)
>SRA1015819	Ile	GAT
                   c      ACCA acgcatttgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T C
                    T     C A T T C     A
      G G A        A      | | | | |     A
    T       C T C G       G T A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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