The detailed information of tRNA gene sequence


Sequence ID>SRA1015843
Genome IDSRR023846.224717
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 177
End posion on genome 253
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggttttcgg
tRNA gene sequence 
GGCGAAGTAGCTCAGCTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
ctcgcggatt
Secondary structure (Cloverleaf model)
>SRA1015843	Met	CAT
                   g      ACCA ctcgcggatt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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