The detailed information of tRNA gene sequence


Sequence ID>SRA1015845
Genome IDSRR023846.225204
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 130
End posion on genome 206
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagaacgcgt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCGAA
TCCTATCGCCCCGACCA
Downstream region at tRNA end position 
tctctcgacc
Secondary structure (Cloverleaf model)
>SRA1015845	Pro	TGG
                   t      ACCA tctctcgacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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