The detailed information of tRNA gene sequence


Sequence ID>SRA1015848
Genome IDSRR023846.226547
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 222
End posion on genome 146
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
cagcgggtgt
tRNA gene sequence
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCTAGGCCCACCA
Downstream region at tRNA end position
cacacaagtg
Secondary structure (Cloverleaf model)
>SRA1015848	Ile	GAT
                   t      ACCA cacacaagtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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