The detailed information of tRNA gene sequence


Sequence ID>SRA1015853
Genome IDSRR023846.229089
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 52
End posion on genome 134
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctagcacaaT
tRNA gene sequence 
GACAGCTTCGCCGAGTGGTTAAGGCGTTAGCCTGCTAAGTTAATGGGGCAACCCGCGTGA
GTTCGAATCTCACAGCTGTCGTtt
Downstream region at tRNA end position 
ttcttatctc
Secondary structure (Cloverleaf model)
>SRA1015853	Ser	GCT
                   T      GTtt ttcttatctc
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C A C T C     A
      T G A        C      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGCAACCCGC
                    T - A
                    T - A
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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