The detailed information of tRNA gene sequence


Sequence ID>SRA1015865
Genome IDSRR023846.233941
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 194
End posion on genome 120
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gccctccggc
tRNA gene sequence 
GGGCGTGTAGCTCAGTGGTAGAGCACTGTGTTGACATCGCAGGGGTCGCAAGTTCAATCC
TTGCCACGCCCACCA
Downstream region at tRNA end position 
ttgaaacccc
Secondary structure (Cloverleaf model)
>SRA1015865	Val	GAC
                   c      ACCA ttgaaacccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     C G T T C     A
        G A        A      | | | | |     A
      T     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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