The detailed information of tRNA gene sequence


Sequence ID>SRA1015872
Genome IDSRR023846.236191
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 226
End posion on genome 155
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccctcgtga
tRNA gene sequence 
TCCGGTATGGTCTAGTGGTTAGGATTTCTGGCTTTCACCCAGGAGGCTCGGGTTCGATTC
CCGGTACCGGAAtgt
Downstream region at tRNA end position 
tttgcacgcc
Secondary structure (Cloverleaf model)
>SRA1015872	Glu	TTC
                   a      Atgt tttgcacgcc
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     G G C C C     A
      T G A        G      + | | | |     G
    G       T C T G       T C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          T     AGGC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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