The detailed information of tRNA gene sequence


Sequence ID>SRA1015887
Genome IDSRR023846.242325
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 106
End posion on genome 181
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caacgggaat
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGTTCGCATGGCATGCGAAAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tttccgccgg
Secondary structure (Cloverleaf model)
>SRA1015887	Ala	GGC
                   t      ACCA tttccgccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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