The detailed information of tRNA gene sequence


Sequence ID>SRA1015888
Genome IDSRR023846.243408
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 84
End posion on genome 160
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcaacggcgt
tRNA gene sequence 
CGGGGAGTGGCGCAGGCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ttgtacgttt
Secondary structure (Cloverleaf model)
>SRA1015888	Pro	TGG
                   t      ACCA ttgtacgttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      G G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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