The detailed information of tRNA gene sequence


Sequence ID>SRA1015889
Genome IDSRR023846.243531
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 46
End posion on genome 121
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atcgcagatt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGGTTGCTTTGCAAGCATCAGGTCGTCGGTTCGATC
CCGACTGGCTCCACCA
Downstream region at tRNA end position 
tcgtctgtct
Secondary structure (Cloverleaf model)
>SRA1015889	Ala	TGC
                   t      ACCA tcgtctgtct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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