The detailed information of tRNA gene sequence


Sequence ID>SRA1015897
Genome IDSRR023846.247238
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 32
End posion on genome 108
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgctgtttca
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tcgtttggat
Secondary structure (Cloverleaf model)
>SRA1015897	Asp	GTC
                   a      GCCA tcgtttggat
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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