The detailed information of tRNA gene sequence


Sequence ID>SRA1015915
Genome IDSRR023846.259697
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 10
End posion on genome 102
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nggcggctca
tRNA gene sequence 
GGAACTGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGGGTTCGAATCCCTCCGGTTCCGCCA
Downstream region at tRNA end position 
gacagctagc
Secondary structure (Cloverleaf model)
>SRA1015915	Ser	GCT
                   a      GCCA gacagctagc
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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