The detailed information of tRNA gene sequence


Sequence ID>SRA1015918
Genome IDSRR023846.260340
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 117
End posion on genome 192
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
accccggaac
tRNA gene sequence 
GGGGCTGTAGCTCAGATGGGAGAGCGCCGCAATCGCACTGCGGAGGTCAGCGGTTCGATC
CCGCTCAGCTCCACCA
Downstream region at tRNA end position 
ccgttttctc
Secondary structure (Cloverleaf model)
>SRA1015918	Ala	CGC
                   c      ACCA ccgttttctc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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