The detailed information of tRNA gene sequence


Sequence ID>SRA1015925
Genome IDSRR023846.265852
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 208
End posion on genome 114
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position
gtgttatggc
tRNA gene sequence
GCCTCGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATGTGAAGATGTGAAGATGTGAA
GGTCGGGTCCCTGGTTCGATCCCGGGTCGCGGCACtt
Downstream region at tRNA end position
ttacacgcgg
Secondary structure (Cloverleaf model)
>SRA1015925	Phe	GAA
                   c      ACtt ttacacgcgg
                     G - C
                     C - G
                     C - G
                     T   C
                     C - G
                     G - C
                     A - T          C T
                    T     G G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGATGTGAAGATGTGAAGGTCGGGTC
                    T - A
                    C - G
                    A - T
                    G   G
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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