The detailed information of tRNA gene sequence


Sequence ID>SRA1015928
Genome IDSRR023846.267067
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 261
End posion on genome 185
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
cgcctacgcg
tRNA gene sequence
GCGGTCGTAGTTCAATTGGTTAGAGCGTCGGCTTGTGATGCCGGATGTTGCGGGTTCAAG
TCCCGTCGGTCGCCCCA
Downstream region at tRNA end position
tttttttagt
Secondary structure (Cloverleaf model)
>SRA1015928	His	GTG
                   g      CCCA tttttttagt
                     G - C
                     C - G
                     G - C
                     G + T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     ATGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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