The detailed information of tRNA gene sequence


Sequence ID>SRA1015931
Genome IDSRR023846.268464
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 73
End posion on genome 149
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgcgtttgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
acgcatacac
Secondary structure (Cloverleaf model)
>SRA1015931	Met	CAT
                   g      ACCA acgcatacac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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