The detailed information of tRNA gene sequence


Sequence ID>SRA1015936
Genome IDSRR023846.270487
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 198
End posion on genome 109
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ctcttttttt
tRNA gene sequence
AGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATGCGGGCAACCGTA
TCGAGAGTTCGAATCTCTTCCTCTCTGCAA
Downstream region at tRNA end position
atattaagcg
Secondary structure (Cloverleaf model)
>SRA1015936	Ser	GGA
                   t      GCAA atattaagcg
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGCGGGCAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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