The detailed information of tRNA gene sequence


Sequence ID>SRA1015940
Genome IDSRR023846.274504
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 139
End posion on genome 64
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnngtt
tRNA gene sequence 
GTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
cgattacccg
Secondary structure (Cloverleaf model)
>SRA1015940	Glu	TTC
                   t      GCCA cgattacccg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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