The detailed information of tRNA gene sequence


Sequence ID>SRA1015947
Genome IDSRR023846.278402
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 191
End posion on genome 281
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgtcgtcag
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACCGGTCTTGAAAACCGGCGAAGCGGGCAACCGT
TCCGTGGGTTCGAATCCCACCTCTTCCGCCG
Downstream region at tRNA end position 
ccgttttccc
Secondary structure (Cloverleaf model)
>SRA1015947	Ser	TGA
                   g      GCCG ccgttttccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGAAGCGGGCAACCGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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