The detailed information of tRNA gene sequence


Sequence ID>SRA1015969
Genome IDSRR023846.288926
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 242
End posion on genome 153
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
cgactggcct
tRNA gene sequence
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGATGGGGTAACTCAT
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position
ggtcagcagt
Secondary structure (Cloverleaf model)
>SRA1015969	Ser	TGA
                   t      GCCA ggtcagcagt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGATGGGGTAACTCATCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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