The detailed information of tRNA gene sequence


Sequence ID>SRA1015973
Genome IDSRR023846.291389
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 59
End posion on genome 135
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cattgggaat
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ccctatgggg
Secondary structure (Cloverleaf model)
>SRA1015973	Asp	GTC
                   t      GCCA ccctatgggg
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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