The detailed information of tRNA gene sequence


Sequence ID>SRA1015981
Genome IDSRR023846.292971
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 171
End posion on genome 244
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
accgtatcga
tRNA gene sequence 
GGCGCGATGGCGGAGTGGTGACGCAGAGGACTGCAAATCCTTGCACCCGGGTTCGATTCC
CGGTCGCGCCTCCA
Downstream region at tRNA end position 
acggacggnn
Secondary structure (Cloverleaf model)
>SRA1015981	Cys	GCA
                   a      TCCA acggacggnn
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G G C G       C C G G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GCAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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