The detailed information of tRNA gene sequence


Sequence ID>SRA1015988
Genome IDSRR023846.295034
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 131
End posion on genome 55
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gatactccgt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
attgcatcaa
Secondary structure (Cloverleaf model)
>SRA1015988	Pro	CGG
                   t      ACCA attgcatcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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