The detailed information of tRNA gene sequence


Sequence ID>SRA1016005
Genome IDSRR023846.305932
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 10
End posion on genome 100
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nggcggcacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACGTCAAAAGCGT
ATCGTGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tcaaacttaa
Secondary structure (Cloverleaf model)
>SRA1016005	Ser	GCT
                   c      GCCA tcaaacttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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