The detailed information of tRNA gene sequence


Sequence ID>SRA1016039
Genome IDSRR023846.320070
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 171
End posion on genome 248
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgggacaaaa
tRNA gene sequence 
GGGAGATTAGCTCAGCTGGTTCAGAGCATCTGCCTTACAAGCAGAGGGTCACTGGTTCGA
ACCCAGTATCTCCCACCA
Downstream region at tRNA end position 
ttgataaaca
Secondary structure (Cloverleaf model)
>SRA1016039	Val	TAC
                   a      ACCA ttgataaaca
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A          C A
                    T     T G A C C     A
    T C G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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