The detailed information of tRNA gene sequence


Sequence ID>SRA1016044
Genome IDSRR023846.322797
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 276
End posion on genome 201
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
GGACGCATAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCTTGGTTCGAGC
CCAAGTGCGTCCACCA
Downstream region at tRNA end position 
ttttccacct
Secondary structure (Cloverleaf model)
>SRA1016044	Lys	CTT
                   t      ACCA ttttccacct
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          C G
                    T     G A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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