The detailed information of tRNA gene sequence


Sequence ID>SRA1016075
Genome IDSRR023846.338377
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 202
End posion on genome 113
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgccgatccg
tRNA gene sequence 
GGAAGAGTGTCCGAGTGGTTTAAGGAACTGGTCTTGAAAACCAGCGAGTGGGCAACCGCT
CCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
gttctctgcg
Secondary structure (Cloverleaf model)
>SRA1016075	Ser	TGA
                   g      GCCA gttctctgcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGAGTGGGCAACCGCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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