The detailed information of tRNA gene sequence


Sequence ID>SRA1016077
Genome IDSRR023846.338971
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 207
End posion on genome 118
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgatcc
tRNA gene sequence 
GGAGACGTGGGTGAGCGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ttttgatttt
Secondary structure (Cloverleaf model)
>SRA1016077	Ser	GCT
                   c      GCCA ttttgatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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