The detailed information of tRNA gene sequence


Sequence ID>SRA1016081
Genome IDSRR023846.340326
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 97
End posion on genome 173
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccaccgcac
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGTTAGAGCGTCGGTCTCCAAAACCGAAGGCCCTCGGTTCGAA
TCCGAGCACTCCTGCCA
Downstream region at tRNA end position 
tttctcccat
Secondary structure (Cloverleaf model)
>SRA1016081	Trp	CCA
                   c      GCCA tttctcccat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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