The detailed information of tRNA gene sequence


Sequence ID>SRA1016088
Genome IDSRR023846.342990
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 39
End posion on genome 123
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
ctcagtccct
tRNA gene sequence
GCCCGGGTGGTGAAATTGGTAGACGCAGGGGACTCAAAATCCCCCACCGAAAGGTGTGCC
GGTTCGATTCCGGCCCCGGGCACCA
Downstream region at tRNA end position
cgaatgatcg
Secondary structure (Cloverleaf model)
>SRA1016088	Leu	CAA
                   t      ACCA cgaatgatcg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CACCGAAAGGTGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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