The detailed information of tRNA gene sequence


Sequence ID>SRA1016089
Genome IDSRR023846.343207
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 215
End posion on genome 142
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cccgcaccac
tRNA gene sequence 
GCGCTGCTAGCTCAATTGGCAGAGCAGCTGACTCTTAATCAGCGGGTTCCCGGTTCGAGT
CCGGGGCGGCGCACag
Downstream region at tRNA end position 
caggaggccc
Secondary structure (Cloverleaf model)
>SRA1016089	Lys	CTT
                   c      ACag caggaggccc
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C
                     C - G          T G
                    T     G G G C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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