The detailed information of tRNA gene sequence


Sequence ID>SRA1016093
Genome IDSRR023846.345785
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 76
End posion on genome 172
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgcggctcaa
tRNA gene sequence 
CGGAAGGAAATCGTCCCTGGTGGGGCGGCTGGGCTTCAAACCCAGTTGGTGGCGCCATGC
GTCGCCGGGTGGGTTCGACTCCCGCATCCTTCCGCCAt
Downstream region at tRNA end position 
cctatctgtt
Secondary structure (Cloverleaf model)
>SRA1016093	SeC	TCA
                   a      CCAt cctatctgtt
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          C T
                    A     A C G C C     C
      C C C        A      | |   |       A
    T       T G C T       T G G G T     G
    G       +     +                 T C
    G       G G C G
      T G G        G     TTGGTGGCGCCATGCGTCGCCGGG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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