The detailed information of tRNA gene sequence


Sequence ID>SRA1016103
Genome IDSRR023846.349894
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 15
End posion on genome 105
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggcggcacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACGTCAAAAGCGT
ATCGTGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tcaagacaat
Secondary structure (Cloverleaf model)
>SRA1016103	Ser	GCT
                   c      GCCA tcaagacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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