The detailed information of tRNA gene sequence


Sequence ID>SRA1016129
Genome IDSRR023846.358942
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaagttacgg
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCGATT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
cctgaaggtg
Secondary structure (Cloverleaf model)
>SRA1016129	Trp	CCA
                   g      GCCA cctgaaggtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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