The detailed information of tRNA gene sequence


Sequence ID>SRA1016133
Genome IDSRR023846.361058
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 109
End posion on genome 34
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctaaggtttt
tRNA gene sequence 
GACCCTATCGTCTAGAGGCCTAGGACACCACCCTTTCACGGTGGCTACCGGGGTTCGAAT
CCCCGTAGGGTCGCCA
Downstream region at tRNA end position 
gtttcacttc
Secondary structure (Cloverleaf model)
>SRA1016133	Glu	TTC
                   t      GCCA gtttcacttc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CTAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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