The detailed information of tRNA gene sequence


Sequence ID>SRA1016136
Genome IDSRR023846.362467
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 83
End posion on genome 158
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cggccggaaa
tRNA gene sequence 
GCTCCCATCGTCTAGCGGTCTAGGACGTCGCCCTCTCACGGCGAAAACAGGGGTTCGATT
CCCCTTGGGAGCGCCA
Downstream region at tRNA end position 
gcggtctttc
Secondary structure (Cloverleaf model)
>SRA1016136	Glu	CTC
                   a      GCCA gcggtctttc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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