The detailed information of tRNA gene sequence


Sequence ID>SRA1016142
Genome IDSRR023846.366856
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 199
End posion on genome 273
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cggcttgcag
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCACTACCTTGACATGGTAGGGGTCACAGGTTCGATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016142	Val	GAC
                   g      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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