The detailed information of tRNA gene sequence


Sequence ID>SRA1016143
Genome IDSRR023846.366872
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 241
End posion on genome 170
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GCGCGGGTAGCTCAGTGGTAGAGCGTTCGATTGCAGCTCGAAGGGTCACTGGTTCAATCC
CGGTCCCGCGCTtct
Downstream region at tRNA end position 
tgttcttgtc
Secondary structure (Cloverleaf model)
>SRA1016143	Cys	GCA
                   c      Ttct tgttcttgtc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          C T
                    T     T G G C C     A
        G A        A      | | + | |     A
      T     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  T       C
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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