The detailed information of tRNA gene sequence


Sequence ID>SRA1016163
Genome IDSRR023846.376186
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 171
End posion on genome 99
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gtgtcatcat
tRNA gene sequence 
TGGGGTATGGTGTAATTGGCAACACGACTGATTCTGGTTCAGTTGTTCTTGGTTCGAGTC
CAGGTACCCCAGCat
Downstream region at tRNA end position 
cgagaaaggc
Secondary structure (Cloverleaf model)
>SRA1016163	Gln	CTG
                   t      GCat cgagaaaggc
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G A C C     A
      T A A        G      | + | | |     G
    T       T G T G       C T T G G     C
    G       | | | |                 T T
    G       A C A C
      C A          G     TGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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