The detailed information of tRNA gene sequence


Sequence ID>SRA1016164
Genome IDSRR023846.376214
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 160
End posion on genome 249
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgaccttgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAACGTACCGCACTCGAAATGCGGCGTACCCGCGAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttaccttgc
Secondary structure (Cloverleaf model)
>SRA1016164	Ser	CGA
                   c      GCCA tttaccttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G           | +                 T T
    T       A C G T
      C G A        A     CGTACCCGCGAGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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