The detailed information of tRNA gene sequence


Sequence ID>SRA1016169
Genome IDSRR023846.378117
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 151
End posion on genome 78
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tgaaaacaaa
tRNA gene sequence
GCGCTCTTAGTTCAGTTCGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAA
TCCTACAGAGCGTGatg
Downstream region at tRNA end position
attcaaatcc
Secondary structure (Cloverleaf model)
>SRA1016169	Trp	CCA
                   a      Gatg attcaaatcc
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T A G G     C
    C       | | | |                 T T
    G       G A A C
      G T A        G     ATGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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