The detailed information of tRNA gene sequence


Sequence ID>SRA1016170
Genome IDSRR023846.378412
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 109
End posion on genome 34
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcaacgagat
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTAGAGCGGATCCCTTACACGGATTAGGTCGGGAGTTCGAGC
CTCTCAGCGCCCACCA
Downstream region at tRNA end position 
agcatctcga
Secondary structure (Cloverleaf model)
>SRA1016170	Val	TAC
                   t      ACCA agcatctcga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    A - T
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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